Notes
Slide Show
Outline
1
BMS 631 - Lecture 2
2
Herzenberg
3
Dittrich & Göhde

  • Dittrich & Gohde - 1969 -  Impulscytophotometer  (ICP)-  used ethidium bromide for a DNA stain and a high NA objective used as a condenser and collection lens



4
Kamentsky
5
History
6
Herzenberg & Becton Dickinson
7
Mack Fulwyler
  • Coulter Electronics manufactured the TPS-1 (Two parameter sorter) in 1975 which could measure forward scatter and fluorescence using a 35mW argon laser.
8
Shapiro
9
Hemalog D
10
Coulter Electronics
  • 1977-78 developed the Epics series of instruments  which were essentially 5 watt argon ion laser instruments, complete with a multiparameter data analysis system, floppy drive and graphics printer.
11
Biophysics -Ortho
  • Ortho Diagnostics (Johnson and Johnson) purchased Biophysics in 1976 and in 1977 the System 50 Cytofluorograph was developed - this was a droplet sorter, with a flat sided flow cell, forward and orthogonal scatter, extinction, 2 fluorescence parameters, multibeam excitation, computer analysis option.







  • 1979 - NIH scientists had added  a krypton laser at 568 nm to excite Texas Red fluorescence at 568 nm and emit at 590-630 nm. Argon (488 nm FITC was measured simultaneously without signal cross-talk - thus the FACS IV was developed (B-D).
12
Stuart Schlossman
  • Schlossman at the Farber Institute in Boston, began to make monoclonal antibodies to white blood cell antigens in 1978. Eventually he collaborated with Ortho Diagnostics who distributed the famous “OK T4” etc.,  Mabs
  • Coulter Immunology also distributed his antibodies


13
Introductory Terms and Concepts
14
Concepts
15
Instrument Components
16
Data Analysis Concepts
17
Data Presentation Formats
18

Light and Matter

J.Paul Robinson
Professor of Immunopharmacology
School of Veterinary Medicine, Purdue University
19
Light and Matter
  • Energy
    • joules, radiant flux (energy/unit time)
    • watts  (1 watt=1 joule/second)
  • Angles
    • steradians  - sphere radius r - circumference is 2pr2; the angle that intercepts  an arc r along the circumference is defined as 1 radian. (57.3 degrees) a sphere of radius r has a   surface area of 4pr2. One steradian is defined as the solid angle which intercepts as area equal; to r2 on the sphere surface
20
Terms
  • Side scatter, forward angle scatter, cell volume, coulter volume:
  • Understand light scattering concepts; intrinsic and extrinsic parameters
  • Photometry:
  • Light - what is it - wavelengths we can see 400-750 nm, most sensitive around 550 nm. Below 400 nm essentially measuring radiant energy. Joules (energy) radiant flux (energy per unit time) is measured in watts (1 watt=1 joule/second).
  • Steradian (sphere radius r has surface area of 4 pr2; one steradian is defined as that solid angle which intercepts an area equal to r2 on the surface.
  • Mole - contains Avogadro's number of molecules (6.02 x 1023) and contains a mass in grams = molecular weight. Photons - light particles - waves - Photons are particles which have no rest mass - pure electromagnetic energy - these are absorbed and emitted by atoms and molecules as they gain or release energy. This process is quantized, is a discrete process involving photons of the same energy for a given molecule or atom. The sum total of this energy gain or loss is electromagnetic radiation propagating at the speed of light (3 x 108 m/s). The energy (joules) of a photon is
  • E=hn and E=hn/l [n-frequency, l-wavelength, h-Planck's constant 6.63 x 10-34 joule-seconds]
  • Energy - higher at short wavelengths - lower at longer wavelengths.
21
Photons and Quantum Theory
  • Photons
    • particles  have no rest mass - composed of pure electromagnetic energy - the absorption and emission of photons by atoms and molecules is the only mechanism for atoms and molecules can gain or lose energy
  • Quantum mechanics
    • absorption and emission are quantized - i.e. discrete process of gaining or losing energy in strict units of energy - i.e. photons of the same energy (multiple units are referred to as electromagnetic radiation)
  • Energy  of a photon
    • can be computed from its frequency (n)
    •  in hertz (Hz) or its wavelength (l) in meters from


          • E=hn and E=hc/l
22
Laser power
  • One photon from a 488 nm argon laser has an energy of
    • E=    6.63x10-34 joule-seconds x 3x108



  • To get 1 joule out of a 488 nm laser you need 2.45 x 1018 photons
  • 1 watt (W) = 1 joule/second a 10 mW laser at 488 nm is putting out 2.45x1016 photons/sec


23
What about a UV laser?
24
Polarization and Phase: Interference
  • Electric and magnetic fields are vectors - i.e. they have both magnitude and direction
  • The inverse of the period (wavelength) is the frequency in Hz


25
Interference
26
Light Scatter
  • Materials scatter light at wavelengths at which they do not absorb
  • If we consider the visible spectrum to be 350-850 nm then small particles (< 1/10 l) scatter rather than absorb light
  • For small particles (molecular up to sub micron) the Rayleigh scatter intensity at 0o and 180o are about the same
  • For larger particles (i.e. size from 1/4 to tens of wavelengths) larger amounts of scatter occur in the forward not the side scatter direction - this is called Mie Scatter (after Gustav Mie) - this is how we come up with forward scatter be related to size


27
Rayleigh Scatter
  • Molecules and very small particles do not absorb, but scatter light in the visible region (same freq as excitation)
  • Rayleigh scattering is directly proportional to the electric dipole and inversely proportional to the 4th power of the wavelength of the incident light
28
Reflection and Refraction
  • Snell’s Law: The angle of reflection (Ør) is equal to the angle of incidence (Øi) regardless of the surface material
  • The angle of the transmitted beam (Øt) is dependent upon the composition of the material
29
Refraction & Dispersion
30
Brewster’s Angle
  • Brewster’s angle is the angle at which the reflected light is linearly polarized normal to the plane incidence
  • At the end of the plasma tube, light can leave through a particular angle (Brewster’s angle)  and essentially be highly polarized
  • Maximum polarization occurs when the angle between reflected and transmitted light is 90o
      • thus Ør + Øt  = 90o
      • since sin (90-x) = cos x
      • Snell’s provides  (sin Øi / cos Øi   )  =  n2/n1


      • Ør  is Brewster’s angle

31
Brewster’s Angle
32
Lecture Summary
  • History of Flow
  • Principles of light and matter
  • Basic Optics
  • Essentials of lasers